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What Seminar
When Monday, September 27, 2004
from 09:00 to 12:00
Where Room A-371, 3rd FloorUPR-Medical Sciences Campus, Main Building
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RCMI Seminars Series


WORKSHOP: Current Concepts and Techniques for Protein Biomarker Discovery and Identification

James E. Evans
Director of the Proteomics and Mass Spectrometry Facility
University of Massachusetts Medical School

James A. Mobley
Research Instructor
Vanderbilt University

Dr. Irene Bosch
Assistant Professor
Center for Infectious Disease and Vaccine Research
University of Massachusetts Medical School


Lecture 1: Biomarker Discovery via Mass Profiling – the Importance of Quality Mass Spectrometry and Data Analysis.
Topics covered:
  1. SELDI vs. MALDI - When to apply each and why.
  2. The pros, cons, and current techniques in profiling mass spectrometry - review of the literature.
  3. Assessing and applying instrumental, experimental, and population error prior to data analysis.
  4. Biomarker analysis - weeding out those important proteins in-silico.
  5. The importance of maintaining a Top Down approach in protein ID.

Lecture 2: Protein Identification by Mass Spectrometry.
Topics covered:
  1. Mass Spectrometry Instrumentation for Proteomics – the Basics.
  2. Protein Identification by MALDI Mass Mapping.
  3. Protein Identification by nano-LC-MS/MS.
  4. Techniques for Identification and Quantification of Proteins in Mixtures by nano-LC-MS/MS.

Sponsored by: the RCMI AIDS and Emerging Infectious Diseases Activity, and Dept. of Microbiology

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